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Two novel EBP mutations in Conradi-Hünermann-Happle syndrome


European Journal of Dermatology. Volume 18, Number 4, 391-3, July-August 2008, Genes and skin

DOI : 10.1684/ejd.2008.0433

Summary  

Author(s) : Surasawadee Ausavarat, Pranoot Tanpaiboon, Siraprapa Tongkobpetch, Kanya Suphapeetiporn, Vorasuk Shotelersuk , Division of Medical Genetics and Metabolism, Department of Pediatrics, Faculty of Medicine, Sor Kor Building 11th floor, King Chulalongkorn Memorial Hospital, Bangkok 10330, Thailand, Inter-Department Program of Biomedical Science, Graduate School, Chulalongkorn University, Bangkok, Thailand, Department of Pediatrics, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.

Summary : Conradi-Hünermann-Happle syndrome, also known as chondrodysplasia punctata type 2 (CDPX2), is an X-linked dominant disorder characterized by skin defects, skeletal and ocular abnormalities. CDPX2 was shown to be caused by mutations in the gene encoding emopamil binding protein (EBP). At least 58 different mutations have been described. Here we present clinical and molecular findings in two unrelated Thai girls with CDPX2. Mutation analysis by PCR-sequencing the entire coding region of EBP successfully revealed two potentially pathogenic, novel mutations, c.616G→T and c.382delC. This study has expanded the spectrum of the EBP gene mutations causing CDPX2.

Keywords : Conradi-Hünermann-Happle, chondrodysplasia punctata type 2, EBP

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ARTICLE

Auteur(s) : Surasawadee Ausavarat1,2, Pranoot Tanpaiboon3, Siraprapa Tongkobpetch1, Kanya Suphapeetiporn1, Vorasuk Shotelersuk1

1Division of Medical Genetics and Metabolism, Department of Pediatrics, Faculty of Medicine, Sor Kor Building 11th floor, King Chulalongkorn Memorial Hospital, Bangkok 10330, Thailand
2Inter-Department Program of Biomedical Science, Graduate School, Chulalongkorn University, Bangkok, Thailand
3Department of Pediatrics, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand

accepté le 27 Février 2008

The Conradi-Hünermann-Happle syndrome (MIM 302960), also known as X-linked dominant chondrodysplasia punctata type 2 (CDPX2), is a rare developmental disorder resulting from a deficiency of enzymes involved in cholesterol biosynthesis [1, 2]. It is characterized by skeletal dysplasia, skin and ocular abnormalities. Skin manifestations include congenital linear, whorled or blotchy follicular hyperkeratosis with generalized erythroderma. Erythroderma and scaling usually resolve in the first few months of life leaving follicular atrophoderma, variable ichthyosis, dyspigmentation, partial alopecia and lusterless hair. Abnormal skeletal involvement includes asymmetric limb shortening, scoliosis and epiphyseal stippling [1-4]. The disease is usually lethal in hemizygous males while affected females exhibit segmentally arranged clinical features due to functional mosaicism caused by X-inactivation [5-7].

CDPX2 is caused by mutations in the emopamil binding protein (EBP) gene [1, 2]. The EBP gene comprises 5 exons encoding a 1.0-kb transcript. Its protein functions as a sterol isomerase enzyme in the cholesterol synthesis pathway [8, 9]. Nevertheless, how depletion of this enzyme contributes to a phenotype seen in this disorder remains elusive. In addition to the finding of abnormally elevated levels of the cholesterol precursors, 8-dehydrocholesterol and 8(9)-cholestenol, diagnosis of CDPX2 could be confirmed by identification of mutations in the EBP gene. There are at least 58 different disease-causing mutations reported to date (http://www.hgmd.cf.ac.uk, accessed January 2008).

In this study, we describe two unrelated Thai girls with CDPX2, one being sporadic and the other being familial, with novel mutations in the EBP gene.

Materials and methods

Clinical description

Patient 1 was a full term female infant, who was born to a healthy, G2P1, 32-year-old mother. She was noted to have asymmetric limb shortening and skin lesions. She had flat face with a saddle nose. The right arm and leg were shorter than the left. She had hyperkeratotic brownish plaques on the lower extremities following the lines of Blaschko together with generalized brownish scales sparing scalp, face, palms, soles, and inguinal area (figure 1A). Her hair and nails appeared normal. At 2 months of age, she developed bilateral cataracts. A skeletal survey performed at two weeks of age demonstrated asymmetric shortening of the humeri and femora (figure 1B). There were generalized punctate calcifications of the epiphyseal regions of long bones, vertebrae and pelvic bone (figure 1C). No other family member had similar manifestations.

Patient 2 first presented to our clinic at the age of 13 years. She was noted to have dry and scaly skin since birth. Her left cornea appeared cloudy at one month of age. Her mental development was normal. Physical examination revealed a height of 122 cm (– 4 SD). She had sparse and coarse lusterless hair with patchy areas of alopecia. Bilateral cataracts were present. The bridge of the nose was flat (figure 1D). She had atrophic linear skin lesions following the lines of Blaschko mostly on the extremities. The left upper arm and upper leg appeared shorter than the right. Postaxial polydactyly of her left hand and pronounced kyphoscoliosis were also present. X-ray examination of the skeleton confirmed the clinical findings of asymmetrical shortening of humerus and femur, postaxial polydactyly and scoliosis (figures 1E and F).

The mother of patient 2 was 37 years old with a height of 142 cm. She had sparse hair and atrophic linear skin lesions following the lines of Blaschko. She did not manifest cataracts, polydactyly, scoliosis, or asymmetric limb shortening. No other family member had similar findings. In neither family of the two unrelated patients, was there any history of consanguinity, excess miscarriage or male stillbirth.

Mutation analysis

After informed consent was received, 3 mL of peripheral blood from probands and their available parents were obtained. Genomic DNA was extracted from peripheral leukocytes according to standard protocols. Direct cycle sequencing of PCR-amplified DNA representing all coding exons of EBP was performed as previously described [10]. For a novel missense mutation, restriction enzyme digestion was used to confirm its presence in the patient and to screen in 100 control chromosomes from unaffected ethnically-matched individuals.

Results

PCR-sequencing analysis of the entire coding sequence of EBP revealed that patient 1 was heterozygous for a G to T transversion at nucleotide position 616 (c.616G→T), in exon 5 (figure 2, upper left panel). The mutation is expected to result in an aspartic acid to tyrosine substitution at codon 206 (p.D206Y). The mutation was confirmed by digestion of the PCR products with the restriction enzyme TfiI (data not shown). The c.616G→T was de novo and was not detected in 100 ethnic-matched control X chromosomes.

Patient 2 was heterozygous for a deletion of a cytosine at nucleotide position 382 (c.382delC) in exon 3 of the EBP gene (figure 2, upper right panel). The loss of a cytosine leads to a frameshift starting at codon 128 onwards and introduces a premature stop codon at position 137. Her mother was found to harbor the same mutation.

Discussion

We described two unrelated Thai girls who had Conradi-Hünermann- Happle syndrome with two novel mutations in the EBP gene. Both patients had typical manifestations of CDPX2, with one of them having postaxial polydactyly, a rare feature of CDPX2 [3].

A single base transversion c.616G→T in exon 5 resulting in an aspartic acid to tyrosine substitution at position 206 (p.D206Y) was detected in patient 1. This mutation has never been previously described and is located at the most 3’ position reported to date. Even though no in vitro study has been performed to investigate the functional consequence of this mutation, there are several lines of evidence supporting it as a disease-causing mutation. First, the variant is a non-conservative substitution, introducing a charge difference. Aspartic acid is negatively charged while tyrosine is uncharged. Second, the aspartic acid at codon 206 is located at a highly conserved cytoplasmic domain. Third, PolyPhen (http://coot.embl.de/PolyPhen) predicts it to be possibly damaging. Fourth, this variant has not been reported to be a polymorphism in NCBI SNP (http://www.ncbi. nlm.nih.gov/ projects/SNP), Ensembl (http://www.ensembl.org/index.html) or PupaSUITE/PupaSNP (http://pupasuite.bioinfo.cipf.es) databases. And lastly, it was not detected in 100 ethnically-matched control chromosomes.

The c.382delC identified in patient 2 is also novel. This alteration is expected to result in changing the leucine to cysteine at position 128, subsequent changes of 8 amino acids and truncation at amino acid 137 (p.L128CfsX137), which eliminates almost half of the EBP protein. It is likely to result in either an absent or nonfunctional truncated protein. Interestingly, in addition to features commonly found in CDPX2, this patient with c.382delC had postaxial polydactyly. This rare feature has been previously detected in four molecularly-confirmed patients with CDPX2 [2, 11, 12]. Two harbored different insertions (c.166-167insT and c.268-269insCT) and the other two had nonsense mutations (c.328C→T and c.298C→T) resulting in frameshifts and truncated proteins, respectively.

There has been no clear evidence of a genotype-phenotype correlation. However, it has been suggested that females with nonsense or frameshift mutations producing a nonfunctional protein are likely to demonstrate a more severe involvement of the disorder while patients with missense mutations do not consistently present all clinical features, particularly ocular abnormalities [13]. Our two patients, one with a missense mutation and the other with a frameshift alteration, had typical features of CDPX2 including skeletal, skin and ocular abnormalities. The latter, with a frameshift, also had postaxial polydactyly. No correlation, however, could be suggested from our study.

The mother of patient 1 was asymptomatic. Nonetheless, it has been shown that a mutation can be found in asymptomatic mothers of sporadic cases. We, therefore, performed mutation analysis of her parents and found that they both had only the wild-type alleles. Cautiously, the inability to detect a mutation in the mother of a sporadic case does not completely eliminate the risk of recurrence for a woman who has an affected daughter, since germline mosaicism has been reported [7]. The mother of patient 2 had clinical manifestations but significantly milder than those of her affected daughter. Inter- and intra-familial variations as well as incomplete penetrance have been demonstrated [6, 7, 14]. The expressivity of a particular mutation is likely to reflect the pattern and timing of X-inactivation.

In summary, we reported two unrelated Thai girls with CDPX2. Two potentially pathogenic novel mutations, c.616G→T and c.382delC were identified. This study expands the genotypic spectrum of EBP mutations.

Acknowledgment

We would like to thank the patients and their families for participation in this study. This study was supported by the Research Unit Fund, Chulalongkorn University, the National Center for Genetic Engineering and Biotechnology, and the Thailand Research Fund. Conflict of interest: none.

References

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