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Identification of the keratin 9 (KRT9) N161S mutation in a Chinese kindred with epidermolytic palmoplantar keratoderma


European Journal of Dermatology. Volume 18, Number 4, 387-90, July-August 2008, Genes and skin

DOI : 10.1684/ejd.2008.0432

Summary  

Author(s) : Wenhua Feng, Weitian Han, Xiaohui Man, Miao Jiang, Chaoying Bian, Ge Wang, Xuefu Li, Dongxu Yi, Jianxin Li , Key Laboratory of Reproductive Health of Liaoning, 10 PuHe Street, Huanggu District, Shenyang, 110031, China.

Summary : We present a family from Northeast China affected by epidermolytic palmoplantar keratoderma (EPPK) in which we confirmed the presence of the N161S mutation as the result of a 548A>G transition in exon1 of the keratin 9 gene. Genomic DNA from peripheral blood of all available members in this family was used for amplification of exon 1 of KRT9 by polymerase chain reaction. The mutation was detected by direct sequence analysis and identified by restriction endonuclease DdeI digestion. The finding of the same mutation in all available patients, together with the previous reports of the disease, strongly suggested that position 161 of the KRT9 gene also represents a mutation “hotspot” for EPPK. Our result is an important contribution to the investigation of the genotype/phenotype correlation and affords molecular genetic knowledge for future clinical diagnosis and gene therapy of EPPK.

Keywords : epidermolytic palmoplantar keratoderma, keratin 9 gene, mutation detection, mutation hotspot, N161S mutation

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ARTICLE

Auteur(s) : Wenhua Feng, Weitian Han, Xiaohui Man, Miao Jiang, Chaoying Bian, Ge Wang, Xuefu Li, Dongxu Yi, Jianxin Li

Key Laboratory of Reproductive Health of Liaoning, 10 PuHe Street, Huanggu District, Shenyang, 110031, China

accepté le 24 Février 2008

Epidermolytic palmoplantar keratoderma (EPPK) is an autosomal dominantly inherited disease which was first described by Vörner in 1901 [1]. It is characterized by diffuse yellow symmetric hyperkeratosis, sharply bordered by erythematous margins, over the entire surface of the palms and soles that appears 3 to 12 months after birth. Reis and colleagues initially mapped EPPK to 17q12-q21, the locus of the type I acidic keratin cluster [2]. The KRT9 gene, one of the type I keratin genes, is the only keratin gene that is expressed solely in the terminally differentiated epidermis of palms and soles [3, 4]. More recently, more than 20 different mutations in exon1 of the KRT9 gene have been identified as responsible for EPPK [5-9]. The mutation in codon 161 of the KRT9 gene was first reported in a French family by Torchard and colleagues in 1994 [6]. To date, 5 different mutations in this codon have been described as responsible for EPPK [5-7, 10, 11]. We present the first family in Northeast China affected by EPPK and carrying the heterozygous N161S mutation in the KRT9 gene. This finding, together with the previous reports of the position 161 mutation of the KRT9 gene in different kindreds around the world strongly suggests that position 161 of the KRT9 gene also represents a mutation “hotspot” for EPPK.

Materials and methods

Family investigation

We examined and ascertained a five-generation family from Chaoyang district of Liaoning province in Northeast China, including 16 affected and 33 unaffected individuals. The clinical diagnosis of the autosomal dominantly inherited disease EPPK was performed in the Affiliated Hospital of China Medical University, based on dermatological and auxiliary examination. Peripheral blood samples were collected from the participants, who gave their informed consent, and were used for DNA extraction.

Genomic DNA amplification

Genomic DNA was extracted from peripheral blood by standard techniques. A 436 bp fragment containing most of exon 1 of the KRT9 gene was amplified by polymerase chain reaction (PCR) using the sense primer: 5′-TTGGCTACAGCTACGGCGGAGGAT-3′ and anti-sense primer: 5′-TGGTCCTTGAGATCATCAATAGTG-3′. These primers for previously reported mutation hot spots were designed according to the KRT9 sequence [GI: 55956898]. The PCR program used consisted of incubation at 94 °C for 5 min; followed by 35 cycles of 94 °C for 30 s, 60 °C for 1 min, 72 °C for 1 min; and then 72 °C for 5 min; reserved at 4 °C. PCR products were identified by 2% agarose gel electrophoresis.

DNA sequencing

PCR products were purified using a DNA fragment purification kit (TaKaRa Biotechnology Co., Ltd.) according to the manufacturer’s recommended protocol. Sequencing processes were performed in Shanghai at GeneCore BioTechnologies Co., Ltd. The sequencing results were contrasted with sequences from the Genebank using the biological software Chromas.

Restriction endonuclease analysis

In order to identify the 161 codon AAT → AGT mutations (N161S) of KRT9, we did further analysis using the biological software Primer Premier5 for restriction of the endonuclease screening function. It was found that the codon 161 (N161S) mutation causes a new endonuclease DdeI restriction site in the vicinity of the 548A>G transition spot, the site is as follows: 5 ’- C ↓ TNAG-3′, 3 ’-GANT ↑ C-5′. And it does not exist in the wild-type KRT9 gene. With the endonuclease digestion of the PCR product (436bp), the wild-type KRT9 gene (without mutation) can not be cut into two fragments, however with the 548A>G mutations, the restriction endonuclease DdeI digestion of the PCR product could generate two fragments of 273 bp and 163 bp. DdeI endonuclease (Promega) was used to digest the PCR products according to the manufacturer’s recommendations. Then we detected the results using 8% polyacrylamide gel electrophoresis.

Results

Family investigation

The pedigree comprised 49 individuals with 16 affected individuals, exhibiting an autosomal dominant disease inheritance (figure 1). All the affected members in the family have similar typical symptoms of epidermolytic palmoplantar keratoderma (figure 2). The onset time of the disease is different in different patients. Most of the patients had symptoms of EPPK within 1 year after birth. The proband (IV-10) showed a diffuse yellow palmoplantar keratoderma with erythematous margins. Affected persons in all five generations had severe epidermolytic hyperkeratosis of a yellowish appearance, surrounded by a characteristic erythematous border, which was completely confined to the palmoplantar surfaces. The nails were not involved. Further clinical examination did not show any other abnormalities.

DNA sequencing

Most coding sequences of exon 1 of the KRT9 gene, including the hotspots reported previously, were amplified by PCR. Subsequent sequencing of a patient’s (V5) DNA fragment revealed one mutation in exon 1 of the KRT9 gene. A base substitution from A to G at nucleotide 548 (548A>G) leading to a substitution of asparagine by serine at codon161 (N161S) was found. This mutation was confirmed by bi-directional sequencing (figure 3). The results showed that patient is the heterozygote of a mutated gene.

Restriction endonuclease analysis

The results of polyacrylamide gel electrophoresis showed that all five affected family members clearly show three bands of two digestion fragments (237bp and 163bp) in addition to the wild type undigested fragment (436bp) after the PCR products digested by restriction endonuclease DdeI. However, all the healthy people in the family lack these two digestion fragments. The digestion fragments also cannot be detected in unrelated healthy individuals (figure 4). The results indicated that all affected family members have the N161S mutation and they are all heterozygotes of mutated gene KRT9 while the healthy individuals only have wild-type AAT.

Discussion

Palmoplantar keratodermas (PPKs) form a group of heterogeneous diseases characterized by marked thickening of the epidermis on the palms and soles. There are three clinical patterns: diffuse, focal with extensive hyperkeratosis at point of friction, and punctuate [12]. Of diffuse PPKs, epidermolytic PPK is probably one of the most common keratin diseases with the prevalence of 4.4-5.2 per 100,000 among diverse populations from different regions around the world [13, 14]. The group of PPKs with a diffuse pattern is also rather heterogeneous. Within the first year of life diffuse keratoderma may start with a focal pattern, but later on a confluent hyperkeratosis is present. As the symptoms and clinical descriptive classifications of PPK are complicated, mapping and identification of genes are important for PPKs. In recent years the more descriptive classification of keratodermas has switched to an exact molecular genetic view, where gene functions are considered. So after establishing a clinical diagnosis of EPPK, confirmation is sometimes needed by means of documentation of biochemical defects or gene mutation. In the future, molecular genetic classification of keratodermas by gene functions will more and more replace the traditional classification schemes [15].

This is the first EPPK kindred reported in Northeast China. In China several EPPK kindreds and gene defects have been reported recently and three novel mutations: L160F, N160H and Y166delinsWL [8, 11, 16] were found. Kindreds that were previously reported originate in the south and the middle of China [8, 11, 16, 17]. China is a very vast country with numerous nationalities, there are obvious genetic differences between the northern and southern populations. The EPPK kindred we present is the first to be reported in Northeast China, which brings valuable information for EPPK research in the Chinese population.

According to new versions of the sequence of keratin 9 published after April 17, 2001 [GI: 13653405], a threonine at position 12 in old versions was changed to serine and arginine. Our sequencing supports this correction. In this article, we describe an amino acid position in keratin 9 according to the sequence published on June 26, 2007 [GI: 55956898], so position 161 of keratin 9 in our article is the same as position 160 in previously published research articles.

The Vörner form of palmoplantar keratoderma may be distinguished from other forms by the early onset and diffuse pattern of thick yellowish hyperkeratosis in the absence of associated features [18]. The disorder usually affects the hands, which are relatively spared in non-EPPK, and histologic examination reveals epidermolytic changes [19]. Here, we diagnosed one Northeast Chinese family on the basis of these criteria, as part of a PPKs study in this country and we have identified the disease-causing mutation, N161S, in all affected family members, occurring within the coil lA segment of the rod domain of KRT9. As EPPK is part of a group of heterogeneous symptoms, one certain mutation may be associated with divers additional symptoms such as breast and ovarian cancer and knuckle pads [6, 8, 17, 20]. All the affected members in this family have similar typical symptoms of epidermolytic palmoplantar keratoderma without knuckle-pad-like lesions. The nails are not involved. Further clinical examination did not show any additional abnormalities or associated diseases. However, the EPPK family with the same N161S mutation of KRT9 which Zhang BR and colleagues [17] reported in Central Southern China (Zhejiang Province) showed us additional phenotypes (knuckle pads and nail lesions). It is worth mentioning that an EPPK family caused by the L160F mutation with similar additional phenotypes, which Lu Y and colleagues [8] reported, also occurred in Central Southern China (Shandong Province). These are the only two EPPK cases with the knuckle-pad-like lesions reported in this area so far. Is it a coincidence? Or do geographical origins play some role in the characteristics of the phenotype? Further studies on these cases may cast new light on the function of Keratin 9.These results are important contributions to the investigation of the genotype/phenotype correlation and afford molecular genetic knowledge for future clinical diagnosis and gene therapy of EPPK.

Keratins are a group of proteins that form the intermediate filament cytoskeleton of epithelial cells, which are important for structural integrity. In keratoderma, excessive production of normal or altered keratin on the palms and soles is found. Keratin 9 is only found in palmoplantar skin and keratin analysis in epidermolytic hereditary palmoplantar keratoderma showed mutations in keratin 9 [7, 12]. Numerous additional investigations have confirmed mutations in keratin 9 in patients with EPPK [21]. Codon 161 is frequently altered in EPPK reports to date, in different kindreds from diverse regions around the world [5, 6, 10, 22-24]. Here we report a family in Northeast China with EPPK carrying the heterozygous N161S mutation in the KRT9 gene. Our findings together with the worldwide presence of the mutation in codon 161 of KRT9, strongly suggest that the position 161 represents a “hot-spot” for mutation in KRT9 gene for EPPK.

Acknowledgements

We would like to thank all of the volunteers who participated in this study, especially the individuals with EPPK and their families. Thanks also to the specialists in Affiliated Hospital of China Medical University who performed the diagnosis for the EPPK patients.

References

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